Here is a list of all class members with links to the classes they belong to:

- c -

• c0 : split_args_t
• c1 : split_args_t
• calculateFlushIntervals() : Job
• callback : Peer
• callGetOpt() : AbstractAlignerParameters
• changePath() : SpecialRowsPartition
• circularLoad() : Buffer2 , Buffer
• circularSkip() : Buffer2
• circularStore() : Buffer , Buffer2
• clear_n : SequenceModifiers
• clearPrunedBlocks() : AbstractDiagonalAligner
• clearSpecialRowsArea() : Job
• clearSpecialRowsAreas() : Job
• clearStatistics() : AbstractBlockAligner , AbstractDiagonalAligner , IAligner
• clone() : InitialCellsReader
• close() : ReversedCellsReader , SocketCellsReader , SocketCellsWriter , SplitCellsReader , TeeCellsReader , URLCellsReader , URLCellsWriter , SpecialRowReader , BlocksFile , FirstRow , SpecialRow , CrosspointsFile , SpecialRowFile , SpecialRowRAM , BufferedCellsReader , BufferedCellsWriter , CellsReader , CellsWriter , DummyCellsReader , DummyCellsWriter , FileCellsReader , FileCellsWriter , FileStream , InitialCellsReader
• closeAfterUse : SplitCellsReader
• cmd_connect() : MasaNetCLI
• cmd_create_ring() : MasaNet , MasaNetCLI
• cmd_discover() : MasaNet
• cmd_help() : MasaNetCLI
• cmd_peer_request() : MasaNet
• cmd_quit() : MasaNetCLI
• cmd_show_connected() : MasaNetCLI
• cmd_show_connected_remote() : MasaNetCLI
• cmd_show_discovered() : MasaNetCLI
• cmd_show_ring() : MasaNetCLI
• cmd_status() : MasaNetCLI
• cmd_status_request() : MasaNet
• cmd_test_ring() : MasaNet , MasaNetCLI
• cmd_undiscover() : MasaNet
• CmdCreateRing() : CmdCreateRing
• cmdCreators : Peer
• CmdDiscover() : CmdDiscover
• cmdHandlers : MasaNet
• CmdJoin() : CmdJoin
• CmdNotifyScore() : CmdNotifyScore
• CmdPeerList() : CmdPeerList
• CmdPeerRequest() : CmdPeerRequest
• CmdPeerResponse() : CmdPeerResponse
• CmdStatusRequest() : CmdStatusRequest
• CmdStatusResponse() : CmdStatusResponse
• CmdTestRing() : CmdTestRing
• CmdUndiscover() : CmdUndiscover
• col : AbstractBlockAligner , coordinate_t
• Command() : Command
• command_generator() : MasaNetCLI
• commands : MasaNetCLI
• compare_files() : AlignerTester
• complement : SequenceModifiers
• condition : RecurrentTimer , AbstractAlignerSafe
• ConfigParser() : ConfigParser
• Configs() : Configs
• configs : Job
• configureGrid() : AbstractDiagonalAligner , AbstractBlockAligner
• connected : Peer
• connectionType : Peer
• connectToPeer() : MasaNet
• console_completion() : MasaNetCLI
• containsId() : CmdTestRing
• continueFromLastRow() : SpecialRowsPartition
• copy() : PeerList
• copyData() : Sequence
• copyFrom() : MasaNetStatus
• count : Timer::stat_t
• CPUBlockProcessor() : CPUBlockProcessor
• createAutoFlushThread() : Buffer
• createAutoLoadThread() : Buffer
• createBufferFromURL() : BufferFactory
• createChain() : SpecialRowsPartition
• createDispatcherQueue() : AbstractAlignerSafe
• createEvent() : Timer
• createGrid() : AbstractAligner
• createPartition() : SpecialRowsArea
• createPath() : Job
• createReverseData() : SequenceData
• createRing() : MasaNet
• createSplittedPartitions() : SpecialRowsArea
• creator() : CmdStatusRequest , CmdTestRing , CmdCreateRing , CmdDiscover , CmdStatusResponse , CmdNotifyScore , CmdUndiscover , CmdJoin , CmdPeerRequest , CmdPeerResponse
• crosspointIdRecvCounter : AlignerPool
• crosspointIdSentCounter : AlignerPool
• crosspoints : split_args_t
• crosspoints_path : Job
• CrosspointsFile() : CrosspointsFile
• current : SpecialRowReader
• currentExternalDiagonal : AbstractDiagonalAligner
• currentStage : Status
• customize_first_column : aligner_capabilities_t
• customize_first_row : aligner_capabilities_t