SequenceModifiers Class Reference

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Detailed Description

Definition at line 25 of file SequenceModifiers.hpp.

#include <SequenceModifiers.hpp>

List of all members.

Public Member Functions
bool	isCompatible (const SequenceModifiers *other) const
int	getTrimEnd () const
void	setTrimEnd (int trimEnd)
int	getTrimStart () const
void	setTrimStart (int trimStart)
bool	isClearN () const
void	setClearN (bool clearN)
bool	isComplement () const
void	setComplement (bool complement)
bool	isReverse () const
void	setReverse (bool reverse)
Private Attributes
bool	clear_n
bool	complement
bool	reverse
int	trimStart
int	trimEnd

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Member Function Documentation

int SequenceModifiers::getTrimEnd

(

)

const

Definition at line 24 of file SequenceModifiers.cpp.

int SequenceModifiers::getTrimStart

(

)

const

Definition at line 32 of file SequenceModifiers.cpp.

bool SequenceModifiers::isClearN

(

)

const

Definition at line 40 of file SequenceModifiers.cpp.

bool SequenceModifiers::isCompatible

(

const SequenceModifiers *

other

)

const

Definition at line 60 of file SequenceModifiers.cpp.

bool SequenceModifiers::isComplement

(

)

const

Definition at line 48 of file SequenceModifiers.cpp.

bool SequenceModifiers::isReverse

(

)

const

Definition at line 56 of file SequenceModifiers.cpp.

void SequenceModifiers::setClearN

(

bool

clearN

)

Definition at line 44 of file SequenceModifiers.cpp.

void SequenceModifiers::setComplement

(

bool

complement

)

Definition at line 52 of file SequenceModifiers.cpp.

void SequenceModifiers::setReverse

(

bool

reverse

)

Definition at line 67 of file SequenceModifiers.cpp.

void SequenceModifiers::setTrimEnd

(

int

trimEnd

)

Definition at line 28 of file SequenceModifiers.cpp.

void SequenceModifiers::setTrimStart

(

int

trimStart

)

Definition at line 36 of file SequenceModifiers.cpp.

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Member Data Documentation

bool SequenceModifiers::clear_n [private]

Definition at line 41 of file SequenceModifiers.hpp.

bool SequenceModifiers::complement [private]

Definition at line 42 of file SequenceModifiers.hpp.

bool SequenceModifiers::reverse [private]

Definition at line 43 of file SequenceModifiers.hpp.

int SequenceModifiers::trimEnd [private]

Definition at line 46 of file SequenceModifiers.hpp.

int SequenceModifiers::trimStart [private]

Definition at line 45 of file SequenceModifiers.hpp.

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The documentation for this class was generated from the following files:

• SequenceModifiers.hpp
• SequenceModifiers.cpp