AbstractAlignerParameters Member List

This is the complete list of members for AbstractAlignerParameters, including all inherited members.

AbstractAlignerParameters()	AbstractAlignerParameters
arguments	AbstractAlignerParameters	[private]
callGetOpt(int argc, char **argv, option *arguments)	AbstractAlignerParameters	[protected, static]
forkId	AbstractAlignerParameters	[private]
getForkId() const	AbstractAlignerParameters	[virtual]
getLastError() const	AbstractAlignerParameters	[virtual]
IAlignerParameters()	IAlignerParameters	[inline, protected]
lastError	AbstractAlignerParameters	[private]
printFormattedUsage(const char *header, const char *text)	AbstractAlignerParameters	[protected, static]
printUsage() const =0	IAlignerParameters	[pure virtual]
processArgument(int argc, char **argv)=0	IAlignerParameters	[pure virtual]
setForkCount(const int forkCount, const int *forkWeights=NULL)	AbstractAlignerParameters	[protected]
setForkId(int forkId)	AbstractAlignerParameters	[virtual]
setLastError(const char *error)	AbstractAlignerParameters	[protected]
~AbstractAlignerParameters()	AbstractAlignerParameters	[virtual]
~IAlignerParameters()	IAlignerParameters	[inline, protected]