AbstractDiagonalAligner.cpp File Reference

#include "AbstractDiagonalAligner.hpp"
#include <stdlib.h>

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Defines
#define	DEBUG   (0)
	Set to (1) in order to print debug information in the stdout.
#define	MINIMUM_FLUSH_INTERVAL   (8*1024)
	Defines a lower-bound flush interval between two special rows.

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Define Documentation

#define DEBUG   (0)

Set to (1) in order to print debug information in the stdout.

This significantly degrades the performance.

Definition at line 30 of file AbstractDiagonalAligner.cpp.

#define MINIMUM_FLUSH_INTERVAL   (8*1024)

Defines a lower-bound flush interval between two special rows.

Definition at line 35 of file AbstractDiagonalAligner.cpp.