BlockPruningDiagonal.hpp

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/*******************************************************************************
 *
 * Copyright (c) 2010-2015   Edans Sandes
 *
 * This file is part of MASA-Core.
 * 
 * MASA-Core is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation, either version 3 of the License, or
 * (at your option) any later version.
 * 
 * MASA-Core is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public License
 * along with MASA-Core.  If not, see <http://www.gnu.org/licenses/>.
 *
 ******************************************************************************/

class BlockPruningDiagonal;

#ifndef BLOCKPRUNERDIAGONAL_HPP_
#define BLOCKPRUNERDIAGONAL_HPP_

#include "AbstractBlockPruning.hpp"

class BlockPruningDiagonal : public AbstractBlockPruning {
public:
        virtual ~BlockPruningDiagonal();
        BlockPruningDiagonal();

        virtual void initialize();
        virtual void finalize();

        void updatePruningWindow(int diagonal, const score_t* block_scores);
        void getNonPrunableWindow(int* start, int* end);

//      void setBlockHeight(int blockHeight);
//      void setBlockWidth(int blockWidth);
//
//      void setBlockSplitHorizontal(int count, const int* splits);
//      void setBlockSplitVertical(int count, const int* splits);
//
//      void initializePrunableWindows();

private:
//      const score_params_t* score_params;

//      int  seq0_len;
//      int  seq1_len;
//
//      int  bestScore;
//
//      int  blockWidth;
//      int  blockHeight;
//      int  blockCountHorizontal;
//      const int* blockSplitHorizontal;
//      int  blockCountVertical;
//      const int* blockSplitVertical;

        int windowStart;
        int windowEnd;

        //int updateBestScore(const score_t* block_scores);
        //int isBlockPrunable(const int bx, const int by, score_t block_score, int best_score);
        //void getBlockPosition(int bx, int by, int* row, int* column);
};

#endif /* BLOCKPRUNERDIAGONAL_HPP_ */